Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950109.1_cds_XP_016490715.1_81112
CDS Infomation

[gene=LOC107810444] [db_xref=GeneID:107810444] [protein=putative pentatricopeptide repeat-containing protein At3g23330 isoform X2] [protein_id=XP_016490715.1] [location=complement(join(686..2431,2528..2899))] [gbkey=CDS]
Sequence

ATGGATTCTTCCTATGAAAATGTAATCAAAACCCTTTTAAGAAACCCATCTTCCATAAAA
ACAAAGTCACAAGCTACGCAACTCCATGCCCAAATAGTGAAAACAAGAGGGTCGAGGTCT
GTTTCACTTGCCACTATAATTCTTGGCATTTACTCTGACCTTAACCTTTTAAAAGAATCT
TTACAAGTTTTTAACACCTTTTGTTATGTACCCACAAAAGCTTTTAAATCTGTTATTAAG
TGTTACTCTTGTAATGGCTATTTTCTTGATTCTTTAGCTTGTTTTGTTGAAATGAGAGGT
TTTGGAAAGTTACCTGGCCAAGATGTATTTCCTGCTGTAATAAGAGCTTGTACCCATTTG
AAAGAATTGAAGGTTTCATCACCTGATTGCCATGTGTTTGATAAAATTCCCCAGACAAGT
CGCTTTAGTAGTCGTAGAAGCAATTTAGTACCTGTTTTATATGAGGAAACAAGAAATGAG
TTGATAAGAAGTGAAAAAAGCAATTTTGATTCTTTAAATGGGAGGAGAGTGGAAAGGGAT
AAAAGATTAGATAATGTGAGTAAGATTTTTCAAATGATGCCGAATAAAGATGTTGTTTCG
TGGAATACTGTGATTGGTGGGAATGTACAAAGTGGGCTGTATGAGGAAGCTCTGGATATG
TTAAGGGAGATGAGCAATGCCAATCTGAAGCCTGACTGTTTCACTCTGTCGAGCATCCTT
CCTGTCTTTGCGAGGCACGTAGACGTTACAAAGGGAAAAGAGATTCACGGGTATGCGATT
AGACATGGGTTTGACAAAGATGAGTTTATTGCCAGTAGTTTGATTGATATGTACGCGACT
TGTACTAGGGTTGAGGATTCTTATAGGGTGTTCGATTTATTACCACAAAAGGATGATGTT
TCATGGAACACAATAATAGCAGGATGTGTGCAGAATGGTACTTTCGACGAAGGGCTAAGA
TTGTTTAGGCAGATGTTAGCTGCTAATGTCAAGCCTGTGGAAGTTACTTTCTCAGCTATA
CTGCCGGCCTGTGCTCATTTGACCACACTACATCTCGGGAAACAGCTCCACGCATACATA
ACGAGAATGGGATTTGATCAAAACATGTATATAGCTAGCTCACTCGTGGACATGTATGCC
AAATGCGGGAAGATAATGACTGCTAGATGGATTTTCGATAGGATGGAGGTACATGATTCA
GTTTCATGGACAGTCATAACCATGGGCTATGCGTTGAATGGACATGCTCGCGAGGCCATT
ATTCTATTTGAAAATATGGAGCGTGAGAGGATAAAGCCCAATGCTGTGGCCTATCTAGCT
ATTTTAACAGCTTGCAGCCACGCCGGTTTGGTTGATGAAGGTTGGAATTATTTTACAAGT
ATGAGCAAATGTGGTGTTTCTCCTGACATCGAGCACTACGCTGCTATTGCAGACCTTCTT
GGTCGTGCTGGAAGATTAATGGAAGCTTATAAGTTTATCACTGACATGCCTATTAAGCCC
ACCGGGGGTATTTGGGCTACGCTTTTATCAGCTTGCCGAGTTCACAAAAATGTTGAACTG
GCTGAAAATGTTGCCAAAGAAATGACTACAGCCGATCCCGGGAACATGGGACCTTATCTG
CTCTTGTCAAATATGTATTCTGCAGCTGGGAGATGGAAAGATGCATCAAAATTAAGAACT
AATATGAAGAAGAAAGGAATGAGGAAACCACCAGCCTGCAGCTGGATAGAAGTAAGAAAC
AAAGTGCATGGTTTTGTCTCGGGAGACACATCTCACCCATATTATGATCAGATACATGAA
GCACTAAGAGATCTTTATGAACGTTTGAAACAAGAAGGTTACGCTCCTGAGACGAGTGAG
GCACTACATGATGTTGATGAGGAGCAAAAGGGTGATTTGCTCTATACTCATAGTGAACGG
CTTGCAATAGCATTCGGCATTATTAGTACGCCTGCTGGGACAACCATTCGCATAACCAAG
AATCTCCGTGTATGTGTAGACTGTCACACAGCCATAAAATTCATATCCAAAATTTGGGGG
AGAGAGATAATTGTGAGAGATAATAGTCGATTTCACCATTTCAAAGATGGGAATTGCTCA
TGTGGAGACTACTGGTGA

Peptide Sequence

PEP ID

XP_016490715.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 isoform X2 [Nicotiana tabacum]
Sequence

MDSSYENVIKTLLRNPSSIKTKSQATQLHAQIVKTRGSRSVSLATIILGIYSDLNLLKES
LQVFNTFCYVPTKAFKSVIKCYSCNGYFLDSLACFVEMRGFGKLPGQDVFPAVIRACTHL
KELKVSSPDCHVFDKIPQTSRFSSRRSNLVPVLYEETRNELIRSEKSNFDSLNGRRVERD
KRLDNVSKIFQMMPNKDVVSWNTVIGGNVQSGLYEEALDMLREMSNANLKPDCFTLSSIL
PVFARHVDVTKGKEIHGYAIRHGFDKDEFIASSLIDMYATCTRVEDSYRVFDLLPQKDDV
SWNTIIAGCVQNGTFDEGLRLFRQMLAANVKPVEVTFSAILPACAHLTTLHLGKQLHAYI
TRMGFDQNMYIASSLVDMYAKCGKIMTARWIFDRMEVHDSVSWTVITMGYALNGHAREAI
ILFENMERERIKPNAVAYLAILTACSHAGLVDEGWNYFTSMSKCGVSPDIEHYAAIADLL
GRAGRLMEAYKFITDMPIKPTGGIWATLLSACRVHKNVELAENVAKEMTTADPGNMGPYL
LLSNMYSAAGRWKDASKLRTNMKKKGMRKPPACSWIEVRNKVHGFVSGDTSHPYYDQIHE
ALRDLYERLKQEGYAPETSEALHDVDEEQKGDLLYTHSERLAIAFGIISTPAGTTIRITK
NLRVCVDCHTAIKFISKIWGREIIVRDNSRFHHFKDGNCSCGDYW

Transcript Sequence

Gene sequence data has not been registered.